Viral Matrix Protein

Viral matrix proteins are structural proteins linking the viral envelope with the virus core. They play a crucial role in virus assembly, and interact with the RNP complex as well as with the viral membrane. They are found in Morbillivirus, Paramyxovirus, Orthomyxovirus and Pneumovirus.(See for instance Battisti et al. Proc Natl Acad Sci U S A. 2012 Aug 28;109(35):13996-400.

An example is the M1 protein of the influenza virus, showing affinity to the glycoproteins inserted in the host cell membrane on one side and affinity for the RNP complex molecules on the other side, which allows formation at the membrane of a complex made of the viral ribonucleoprotein at the inner side indirectly connected to the viral glycoproteins protruding from the membrane. This assembly complex will now bud out of the cell as new mature viruses.

Viral matrix proteins, like many other viral proteins may exert different functions during the course of the infection.

Viral proteins (early and late)
DNA
Herpes simplex Herpes simplex virus protein vmw65 · HHV capsid portal protein
Hepatitis B HBsAg · HBcAg (HBeAg) · HBx · Hepatitis B virus DNA polymerase
Epstein-Barr EBNA-1 · EBNA-2 · EBNA-3 · LMP-1 · LMP-2 · EBER
RNA
Rotavirus VNPs: NSP1 · NSP2 · NSP4 · NSP5 · NSP6
Influenza

capsid: matrix protein (M1 protein) · viral envelope (M2 protein)

glycoprotein: Influenza hemagglutinin · Neuraminidase
Parainfluenza Parainfluenza hemagglutinin-neuraminidase
Mumps Mumps hemagglutinin-neuraminidase
Measles Measles hemagglutinin
RSV Respiratory syncytial virus G protein
Hepatitis C

VSPs: E1 · E2

VNPs: P7 · NS2 · NS3 · NS4 · NS5
RT
Structure and genome of HIV

VSPs: gag · pol (Integrase, Reverse transcriptase, HIV-1 protease) · env (gp120, gp41)

VRAPs: transactivators (Tat, Rev, Vpr) · Nef · Vif · Vpu
Fusion protein Gag-onc fusion protein

M: VIR

virs(prot)/clss

cutn/syst (hppv/hiva, infl/zost/zoon)/epon

drug(dnaa, rnaa, rtva, vacc)

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