History
The modern X.Org Foundation came into being in 2004 when the body that oversaw X standards and published the official reference implementation joined forces with former XFree86 developers.
X11R6.7.0, the first version of the X.Org Server, was forked from XFree86 4.4 RC2. The immediate reason for the fork was a disagreement with the new license for the final release version of XFree86 4.4, but several disagreements among the contributors surfaced prior to the split. Many of the previous XFree86 developers have joined the X.Org Server project.
The X11R6.9.0/X11R7.0.0 release primarily added a modular build system based on the GNU Autotools. 6.9.0 used the old imake build system whereas 7.0.0 uses autotools, both on the same codebase. The modular path (using GNU Autotools) is however the future direction of the X.Org server, and also saw the X11 binaries moving out of their own /usr/X11R6 subdirectory tree and into the global /usr tree on many Unix systems.
Read more about this topic: X.Org Server
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—Ludwig Wittgenstein (1889–1951)