- Non-fiction books
- The Study of the Negro Problems (1898)
- The Philadelphia Negro (1899)
- The Negro in Business (1899)
- The Souls of Black Folk (1903)
- The Talented Tenth, second chapter of The Negro Problem, a collection of articles by African Americans (September 1903).
- Voice of the Negro II (September 1905)
- John Brown: A Biography (1909)
- Efforts for Social Betterment among Negro Americans (1909)
- Atlanta University's Studies of the Negro Problem (1897–1910)
- The Negro (1915)
- The Gift of Black Folk (1924)
- Africa, Its Geography, People and Products (1930)
- Africa: Its Place in Modern History (1930)
- Black Reconstruction in America (1935)
- What the Negro Has Done for the United States and Texas (1936)
- Black Folk, Then and Now (1939)
- Color and Democracy: Colonies and Peace (1945)
- The Encyclopedia of the Negro (1946)
- The World and Africa (1946)
- The World and Africa, an Inquiry into the Part Which Africa Has Played in World History (1947)
- Peace Is Dangerous (1951)
- I Take My Stand for Peace (1951)
- In Battle for Peace (1952)
- Africa in Battle Against Colonialism, Racialism, Imperialism (1960)
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- Autobiographies
- Darkwater: Voices From Within the Veil (1920)
- Dusk of Dawn: An Essay Toward an Autobiography of a Race Concept (1940)
- The Autobiography of W. E. Burghardt Du Bois, (1968)
- Novels
- The Quest of the Silver Fleece (1911)
- Dark Princess: A Romance (1928)
- The Black Flame Trilogy:
- The Ordeal of Mansart (1957)
- Mansart Builds a School (1959)
- Worlds of Color (1961)
- Archives of The Crisis
- Du Bois edited The Crisis from 1910 to 1933, and it contains many of his important polemics.
- Archives of The Crisis at the University of Tulsa: Modernist Journals Collection
- Archives of The Crisis at Brown University
- Issues of The Crisis at Google Books
- Recordings
- Socialism and the American Negro (1960)
- W.E.B. DuBois A Recorded Autobiography, Interview with Moses Asch (1961)
- Dissertations
- The Suppression of the African Slave Trade to the United States of America: 1638–1870, (Ph.D. dissertation), Harvard Historical Studies, Longmans, Green, and Co. (1896)
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