The Open Bioinformatics Foundation is a non profit, volunteer run organization focused on supporting open source programming in bioinformatics.
The mission of the foundation is to support development of open source toolkits for bioinformatics, organize and run the Bioinformatics Open Source Conference, and generally assist in the development and promotion of open source software development in the life sciences.
The foundation hosts servers for mailing lists, websites, and code repositories for the following open source projects:
- BioDAS (see: ) - XML Infrastructure for exchanging genome annotations
- BioJava - Java toolkit
- BioMOBY - Data and application execution through web services
- BioPerl - Perl toolkit
- BioPipe - Pipelines and workflow project for creating bioinformatics protocol
- BioPython - Python toolkit
- BioRuby - Ruby toolkit
- BioPHP
- BioSQL - RDBMS Database schema for storing sequences, annotations, taxa data.
- OBDA (see: ) - a standard for sequence data access locally, remotely, and via RDBMS
- EMBOSS - Sequence analysis toolkit.
Famous quotes containing the words open and/or foundation:
“Rats!
They fought the dogs and killed the cats,
And bit the babies in the cradles,
And ate the cheeses out of the vats,
And licked the soup from the cooks’ own ladles,
Split open the kegs of salted sprats,
Made nests inside men’s Sunday hats,
And even spoiled the women’s chats
By drowning their speaking
With shrieking and squeaking
In fifty different sharps and flats.”
—Robert Browning (1812–1889)
“[The Settlement House] must be grounded in a philosophy whose foundation is on the solidarity of the human race, a philosophy which will not waver when the race happens to be represented by a drunken woman or an idiot boy.”
—Jane Addams (1860–1935)