The Open Bioinformatics Foundation is a non profit, volunteer run organization focused on supporting open source programming in bioinformatics.
The mission of the foundation is to support development of open source toolkits for bioinformatics, organize and run the Bioinformatics Open Source Conference, and generally assist in the development and promotion of open source software development in the life sciences.
The foundation hosts servers for mailing lists, websites, and code repositories for the following open source projects:
- BioDAS (see: ) - XML Infrastructure for exchanging genome annotations
- BioJava - Java toolkit
- BioMOBY - Data and application execution through web services
- BioPerl - Perl toolkit
- BioPipe - Pipelines and workflow project for creating bioinformatics protocol
- BioPython - Python toolkit
- BioRuby - Ruby toolkit
- BioPHP
- BioSQL - RDBMS Database schema for storing sequences, annotations, taxa data.
- OBDA (see: ) - a standard for sequence data access locally, remotely, and via RDBMS
- EMBOSS - Sequence analysis toolkit.
Famous quotes containing the words open and/or foundation:
“Rain falls into the open eyes of the dead
Again again with its pointless sound
When the moon finds them they are the color of everything”
—William Stanley Merwin (b. 1927)
“In a country where misery and want were the foundation of the social structure, famine was periodic, death from starvation common, disease pervasive, thievery normal, and graft and corruption taken for granted, the elimination of these conditions in Communist China is so striking that negative aspects of the new rule fade in relative importance.”
—Barbara Tuchman (1912–1989)