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To the surprise of mission experts, Explorer 1 changed rotation axis after launch. The elongated body of the spacecraft had been designed to spin about its long (least-inertia) axis but refused to do so, and instead started precessing due to energy dissipation from flexible structural elements. Later it was understood that on general grounds, the body ends up in the spin state that minimizes the kinetic rotational energy (this being the maximal-inertia axis). This motivated the first further development of the Eulerian theory of rigid body dynamics after nearly 200 years—to address this kind of energy and momentum dissipation.

Sometimes the instrumentation would report the expected cosmic ray count (approximately 30 counts per second) but sometimes it would show a peculiar zero counts per second. The University of Iowa (under Van Allen) noted that all of the zero counts per second reports were from an altitude of 2,000+ km (1,250+ miles) over South America, while passes at 500 km (310 mi) would show the expected level of cosmic rays. Later, after Explorer 3, it was concluded that the original Geiger counter had been overwhelmed ("saturated") by strong radiation coming from a belt of charged particles trapped in space by the Earth's magnetic field. This belt of charged particles is now known as the Van Allen radiation belt. The discovery was considered to be one of the outstanding discoveries of the International Geophysical Year.

The acoustic micrometeorite detector detected 145 impacts of cosmic dust in 78,750 seconds. This calculates to an average impact rate of 8.0 × 10-3 impacts per m−2 s−1 over the twelve-day period (29 impacts per hour per square meter).

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