Chemical Formula - Molecular Geometry and Structural Formulas

Molecular Geometry and Structural Formulas

The connectivity of a molecule often has a strong influence on its physical and chemical properties and behavior. Two molecules composed of the same numbers of the same types of atoms (i.e. a pair of isomers) might have completely different chemical and/or physical properties if the atoms are connected differently or in different positions. In such cases, a structural formula is useful, as it illustrates which atoms are bonded to which other ones. From the connectivity, it is often possible to deduce the approximate shape of the molecule.

A chemical formula represents the types and spatial arrangement of bonds in the chemical, though it does not necessarily specify the exact isomer. For example ethane consists of two carbon atoms single-bonded to each other, with each carbon atom having three hydrogen atoms bonded to it. Its chemical formula can be rendered as CH₃CH₃. In ethylene there is a double bond between the carbon atoms (and thus each carbon only has two hydrogens), therefore the chemical formula may be written: CH₂CH₂, and the fact that there is a double bond between the carbons is implicit because carbon has a valence of four. However, a more explicit method is to write H₂C=CH₂ or less commonly H₂C::CH₂. The two lines (or two pairs of dots) indicate that a double bond connects the atoms on either side of them.

A triple bond may be expressed with three lines or pairs of dots, and if there may be ambiguity, a single line or pair of dots may be used to indicate a single bond.

Molecules with multiple functional groups that are the same may be expressed by enclosing the repeated group in round brackets. For example isobutane may be written (CH₃)₃CH. This semi-structural formula implies a different connectivity from other molecules that can be formed using the same atoms in the same proportions (isomers). The formula (CH₃)₃CH implies a central carbon atom attached to one hydrogen atom and three CH₃ groups. The same number of atoms of each element (10 hydrogens and 4 carbons, or C₄H₁₀) may be used to make a straight chain molecule, butane: CH₃CH₂CH₂CH₃.

The alkene but-2-ene has two isomers which the chemical formula CH₃CH=CHCH₃ does not identify. The relative position of the two methyl groups must be indicated by additional notation denoting whether the methyl groups are on the same side of the double bond (cis or Z) or on the opposite sides from each other (trans or E).