Ecology Past and Present
Alameda Creek historically supported Steelhead trout (Oncorhynchus mykiss), Coho salmon (Oncorhynchus kisutch) and Chinook salmon (Oncorhynchus tshawytscha). Confirmation that adult steelhead recently captured attempting to migrate into the Alameda Creek watershed, and the rainbow trout sampled in the upper watershed (trapped above complete migration barriers), are native fish that have their closest genetic associations with other populations within the federally-threatened steelhead trout Central California Coast Evolutionarily Significant Unit has spurred a major effort to restore this historically important steelhead stream by removing barriers to migration and improving habitat quality. Since steelhead trout in the Bay Area and California's Central Coast were listed as threatened under the Endangered Species Act in 1997, numerous organizations, including the Alameda Creek Alliance, and governmental agencies have cooperated on restoration projects to allow migratory fish from the Bay to reach spawning habitat in upper Alameda Creek, beginning in 1999.
Alameda Creek is considered a potential ‘anchor watershed’ for steelhead, regionally significant for restoration of the threatened trout to the entire Bay Area, although by the late 1950s the California Department of Fish and Game decided the steelhead run was no longer viable due to numerous man-made barriers to fish runs. By the early 1970s the Army Corps of Engineers channeled and rip-rapped the lower 12 miles (19 km) of the creek. The last steelhead trout and coho salmon runs were seen in the lower creek in 1964. In 2009, the Alameda County Water District removed a rubber dam that blocked trout passage in the lower creek, adjacent to Quarry Lakes Regional Park. In June, 2010 environmentalists and water district officials celebrated the removal of a dam on Alameda Creek in Fremont, and the planned installation of fish ladders to allow salmonids to bypass two other dams on the lower creek. At the same time, PG&E is working to modify a cement barrier farther upstream in Sunol to help steelhead swim farther into the watershed, water officials said. When those projects are completed, steelhead trout will be able to migrate upstream to spawning habitats in the Sunol Valley for the first time in a half-century.
California’s archaeological record has contributed to knowledge of the prehistoric distribution of fishes in Alameda Creek and its tributaries including Sacramento perch (Archoplites interruptus), Sacramento suckers (Catostomus occidentalis occidentalis), Tule perch (Hysterocarpus traskii), Hitches (Lavinia exilicauda), Hardheads (Mylopharodon conocephalus), Sacramento blackfish, and Sacramento pikeminnow (Ptychocheilus grandis). Many of these fishes still occupy the creek, although the number of introduced exotic fishes continues to increase. Exotic fish species such as the largemouth and Smallmouth basses (Micropterus salmoides and Micropterus dolomieui) respectively, were introduced to Alameda Creek (and the Napa River) by Livingston Stone in 1874.
There is historical evidence of beaver in the Alameda Creek watershed. In 1828 fur trapper Michel La Framboise travelled to "the missions of San José, San Francisco Solano and San Rafael Arcángel. La Framboise stated that "the Bay of San Francisco abounds in beaver", and that he "made his best hunt in the vicinity of the missions". Alexander R. McLeod reported on the progress of the first Hudson's Bay Company fur brigade sent to California in 1829, "Beaver is become an article of traffic on the Coast as at the Mission of St. Joseph alone upwards of Fifteen hundred Beaver Skins were collected from the natives at a trifling value and sold to Ships at 3 Dollars". In the 1840s Kit Carson was granted rights to trap beaver on Alameda Creek in the East Bay where they "abounded...from the mouth of its canyon to the broad delta on the bay". Beaver may be beneficial to efforts to restore salmonids in Alameda Creek as beaver ponds benefit oversummering salmonid smolts by raising the water table which then recharges streams in the dry summer season and also by providing perennial deep pools when streams are only seasonal.
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